../../tmp/servers/virsirnadb/421538815
Result for your query siRNA sequence
RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | Strain name | Start | Alignment | End | % Identity |
Query | virsi2155 | 1 | ggacgaccgggtcctttct | 19 | |
X61596.1 | Hepatitis C virus core, E1, NS1/E2, NS2, NS3, NS4a, NS4b and NS5 gene | 163 | ................... | 181 | 100 |
D10749.1 | HPCHCJ1 Hepatitis C virus genomic RNA, complete genome, isolate: HC-J1 | 180 | ................... | 198 | 100 |
D13558.1 | HPCJ483 Hepatitis C virus genome, complete sequence | 180 | ................... | 198 | 100 |
D10750.1 | HPCJ491 Hepatitis C virus genome, complete sequence | 180 | ................... | 198 | 100 |
D90208.1 | HPCJCG Hepatitis C virus ORF gene, complete cds | 168 | ................... | 186 | 100 |
D11168.1 | HPCJTA Hepatitis C virus (HCV) complete genome | 180 | ................... | 198 | 100 |
D11355.1 | HPCJTB Hepatitis C virus genomic RNA, complete genome, strain: JT' | 180 | ................... | 198 | 100 |
M96362.1 | HPCUNKCDS Hepatitis C virus mRNA, complete cds | 181 | ................... | 199 | 100 |
M67463.1 | HPCCGAA Hepatitis C virus subtype 1a, complete genome | 180 | ................... | 198 | 100 |
L02836.1 | HPCCGENOM Hepatitis C virus subtype 1b strain HeBei, complete genome | 169 | ................... | 187 | 100 |
M84754.1 | HPCGENANTI Hepatitis C virus subtype 1b strain Taiwan, complete genome | 180 | ................... | 198 | 100 |
M58335.1 | HPCHUMR Hepatitis C virus subtype 1b, complete genome | 171 | ................... | 189 | 100 |
M62321.1 | HPCPLYPRE Hepatitis C virus subtype 1a, complete genome | 180 | ................... | 198 | 100 |
S62220.1 | Hepatitis C virus subtype 1b, complete genome | 179 | ................... | 197 | 100 |
S62220.1 | Hepatitis C virus subtype 1b, complete genome | 8560 | .........t...g..___ | 8575 | 73 |
U01214.1 | HCU01214 Hepatitis C virus subtype 1b strain HCV-L2, complete genome | 181 | ................... | 199 | 100 |
D14853.1 | HPCCGS Hepatitis C virus (isolate HC-G9) genomic RNA, complete genome | 180 | ................... | 198 | 100 |
D10934.1 | HPCRNA Hepatitis C virus RNA, complete genome sequence | 180 | ................... | 198 | 100 |
D30613.1 | HPCPP Hepatitis C virus complete genome sequence | 180 | ................... | 198 | 100 |
U16362.1 | HCU16362 Hepatitis C virus subtype 1b, complete genome | 181 | ................... | 199 | 100 |
D63857.1 | HPVHCVN Hepatitis C virus gene for E1 and E2/NS1 envelope glycoprotein | 87 | ................... | 105 | 100 |
D50482.1 | HPCK1R3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R3), complete g | 168 | ................... | 186 | 100 |
D50483.1 | HPCK1S1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S1), complete g | 168 | ................... | 186 | 100 |
D50484.1 | HPCK1S3 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S3), complete g | 168 | ................... | 186 | 100 |
D50485.1 | HPCK1S2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-S2), complete g | 168 | ................... | 186 | 100 |
D50481.1 | HPCK1R2 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R2), complete g | 168 | ................... | 186 | 100 |
D50480.1 | HPCK1R1 Hepatitis C virus (strain HCV-1b, clone HCV-K1-R1), complete g | 168 | ................... | 186 | 100 |
D14484.1 | HPCJRNA Hepatitis C virus strain J33 genomic RNA, complete genome | 180 | ................... | 198 | 100 |
U45476.1 | HCU45476 Hepatitis C virus isolate HD-1, complete genome | 180 | ................... | 198 | 100 |
D63822.1 | HPCJK046E2 Hepatitis C virus (isolate JK046) genomic RNA, complete gen | 177 | ................... | 195 | 100 |
D45172.1 | HPCHCPO Hepatitis C virus genomic RNA for HCV polyprotein, complete cd | 180 | ................... | 198 | 100 |
D85516.1 | Hepatitis C virus genomic RNA, complete cds | 180 | ................... | 198 | 100 |
AF011751.1 | Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds | 180 | ................... | 198 | 100 |
AF011752.1 | Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds | 180 | ................... | 198 | 100 |
AF011753.1 | Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds | 180 | ................... | 198 | 100 |
U89019.1 | HCU89019 Hepatitis C virus subtype 1b, complete genome | 179 | ................... | 197 | 100 |
AJ000009.1 | Hepatitis C virus complete genome sequence | 163 | ................... | 181 | 100 |
D89815.1 | Hepatitis C virus genomic RNA, complete sequence | 180 | ................... | 198 | 100 |
AF054247.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete | 180 | ................... | 198 | 100 |
AF054248.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete | 180 | ................... | 198 | 100 |
AF054249.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete | 180 | ................... | 198 | 100 |
AF054250.1 | Hepatitis C virus subtype 1b strain HC-J4, complete genome | 170 | ................... | 188 | 100 |
AJ132996.1 | Hepatitis C virus, complete genome, isolate HCV-AD78 | 179 | ................... | 197 | 100 |
AJ132997.1 | Hepatitis C virus, complete genome, isolate HCV-AD78P1 | 179 | ................... | 197 | 100 |
AJ238799.1 | Hepatitis C virus type 1b complete genome, isolate Con1 | 180 | ................... | 198 | 100 |
AF176573.1 | Hepatitis C virus subtype 1b strain 274933RU, complete genome | 180 | ................... | 198 | 100 |
AB016785.1 | Hepatitis C virus genomic RNA, complete sequence | 180 | ................... | 198 | 100 |
AF165047.1 | Hepatitis C virus subtype 1b strain MD2-1, complete genome | 168 | ................... | 186 | 100 |
AF165048.1 | Hepatitis C virus subtype 1b strain MD2-2, complete genome | 168 | ................... | 186 | 100 |
AF165051.1 | Hepatitis C virus subtype 1b strain MD4-1, complete genome | 168 | ................... | 186 | 100 |
AF165052.1 | Hepatitis C virus subtype 1b strain MD4-2, complete genome | 168 | ................... | 186 | 100 |
AF165053.1 | Hepatitis C virus subtype 1b strain MD5-1, complete genome | 168 | ................... | 186 | 100 |
AF165054.1 | Hepatitis C virus subtype 1b strain MD5-2, complete genome | 168 | ................... | 186 | 100 |
AF165055.1 | Hepatitis C virus subtype 1b strain MD6-1, complete genome | 168 | ................... | 186 | 100 |
AF165056.1 | Hepatitis C virus subtype 1b strain MD6-2, complete genome | 168 | ................... | 186 | 100 |
AF165057.1 | Hepatitis C virus subtype 1b strain MD7-1, complete genome | 168 | ................... | 186 | 100 |
AF165058.1 | Hepatitis C virus subtype 1b strain MD7-2, complete genome | 168 | ................... | 186 | 100 |
AF165059.1 | Hepatitis C virus subtype 1b strain MD8-1, complete genome | 168 | ................... | 186 | 100 |
AF165060.1 | Hepatitis C virus subtype 1b strain MD8-2, complete genome | 168 | ................... | 186 | 100 |
AF165063.1 | Hepatitis C virus subtype 1b strain MD10-1, complete genome | 168 | ................... | 186 | 100 |
AF165064.1 | Hepatitis C virus subtype 1b strain MD10-2, complete genome | 168 | ................... | 186 | 100 |
AF208024.1 | Hepatitis C virus subtype 1b strain MD34, complete genome | 168 | ................... | 186 | 100 |
AF207752.1 | Hepatitis C virus subtype 1b strain MD11, complete genome | 168 | ................... | 186 | 100 |
AF207753.1 | Hepatitis C virus subtype 1b strain MD12, complete genome | 168 | ................... | 186 | 100 |
AF207754.1 | Hepatitis C virus subtype 1b strain MD13, complete genome | 168 | ................... | 186 | 100 |
AF207756.1 | Hepatitis C virus subtype 1b strain MD15, complete genome | 168 | ................... | 186 | 100 |
AF207757.1 | Hepatitis C virus subtype 1b strain MD16, complete genome | 168 | ................... | 186 | 100 |
AF207758.1 | Hepatitis C virus subtype 1b strain MD17, complete genome | 168 | ................... | 186 | 100 |
AF207759.1 | Hepatitis C virus subtype 1b strain MD18, complete genome | 168 | ................... | 186 | 100 |
AF207760.1 | Hepatitis C virus subtype 1b strain MD19, complete genome | 168 | ................... | 186 | 100 |
AF207761.1 | Hepatitis C virus subtype 1b strain MD20, complete genome | 168 | ................... | 186 | 100 |
AF207763.1 | Hepatitis C virus subtype 1b strain MD22, complete genome | 168 | ................... | 186 | 100 |
AF207764.1 | Hepatitis C virus subtype 1b strain MD23, complete genome | 168 | ................... | 186 | 100 |
AF207766.1 | Hepatitis C virus subtype 1b strain MD25, complete genome | 168 | ................... | 186 | 100 |
AF207767.1 | Hepatitis C virus subtype 1b strain MD26, complete genome | 168 | ................... | 186 | 100 |
AF207768.1 | Hepatitis C virus subtype 1b strain MD27, complete genome | 168 | ................... | 186 | 100 |
AF207769.1 | Hepatitis C virus subtype 1b strain MD28, complete genome | 168 | ................... | 186 | 100 |
AF207770.1 | Hepatitis C virus subtype 1b strain MD29, complete genome | 168 | ................... | 186 | 100 |
AF207771.1 | Hepatitis C virus subtype 1b strain MD30, complete genome | 168 | ................... | 186 | 100 |
AF207772.1 | Hepatitis C virus subtype 1b strain MD31, complete genome | 168 | ................... | 186 | 100 |
AF207773.1 | Hepatitis C virus subtype 1b strain MD32, complete genome | 168 | ................... | 186 | 100 |
AF207774.1 | Hepatitis C virus subtype 1b strain MD33, complete genome | 168 | ................... | 186 | 100 |
AF271632.1 | Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome | 180 | ................... | 198 | 100 |
AJ278830.1 | Hepatitis C virus genomic RNA for polyprotein gene | 180 | ................... | 198 | 100 |
AF290978.1 | Hepatitis C virus subtype 1a isolate colonel, complete genome | 168 | ................... | 186 | 100 |
AB049087.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT05 | 149 | ................... | 167 | 100 |
AB049088.1 | Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094 | 180 | ................... | 198 | 100 |
AB049089.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT10 | 149 | ................... | 167 | 100 |
AB049090.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14 | 149 | ................... | 167 | 100 |
AB049091.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14 | 98 | ................... | 116 | 100 |
AB049092.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14 | 149 | ................... | 167 | 100 |
AB049093.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT15 | 149 | ................... | 167 | 100 |
AB049094.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16 | 181 | ................... | 199 | 100 |
AB049095.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16 | 149 | ................... | 167 | 100 |
AB049096.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19 | 149 | ................... | 167 | 100 |
AB049097.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT19 | 149 | ................... | 167 | 100 |
AB049098.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT20 | 149 | ................... | 167 | 100 |
AB049099.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21 | 180 | ................... | 198 | 100 |
AB049100.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT21 | 149 | ................... | 167 | 100 |
AB049101.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT22 | 149 | ................... | 167 | 100 |
AF333324.1 | Hepatitis C virus type 1b polyprotein mRNA, complete cds | 180 | ................... | 198 | 100 |
AY051292.1 | Hepatitis C virus (isolate India) polyprotein mRNA, complete cds | 180 | ................... | 198 | 100 |
AF356827.1 | Hepatitis C virus subtype 1b isolate HCV-S1, complete genome | 180 | ................... | 198 | 100 |
AY045702.1 | Hepatitis C virus isolate HCR6, complete genome | 182 | ................... | 200 | 100 |
AF483269.1 | Hepatitis C virus type 1b isolate HCV-TR1 from Turkey, complete genom | 145 | ................... | 163 | 100 |
AF511948.1 | Hepatitis C virus isolate XF222 polyprotein-like gene, complete seque | 180 | ................... | 198 | 100 |
AF511949.1 | Hepatitis C virus isolate XF223 polyprotein-like gene, complete seque | 180 | ................... | 198 | 100 |
AF139594.2 | Hepatitis C virus subtype 1b strain HCV-N, complete genome | 180 | ................... | 198 | 100 |
AB080299.1 | Hepatitis C virus genomic RNA, complete genome, isolate:M1LE | 180 | ................... | 198 | 100 |
AY587844.1 | Hepatitis C virus strain N589 polyprotein gene, complete cds | 128 | ................... | 146 | 100 |
AY651061.1 | Hepatitis C virus isolate Khaja1, complete genome | 180 | ................... | 198 | 100 |
AB154177.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154178.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154179.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154180.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154181.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154182.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154183.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154185.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154186.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154189.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154190.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154191.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154192.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154194.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154198.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154199.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154200.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154201.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154202.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154203.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154204.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154205.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AB154206.1 | Hepatitis C virus subtype 1b gene for polyprotein, partial cds, isola | 168 | ................... | 186 | 100 |
AY859526.1 | Hepatitis C virus (isolate 6a33), complete genome | 134 | ................... | 152 | 100 |
D84263.2 | Hepatitis C virus (isolate VN235) genomic RNA, complete genome | 177 | ................... | 195 | 100 |
AB191333.1 | Hepatitis C virus genomic RNA, complete genome, strain:0 | 180 | ................... | 198 | 100 |
AY878650.1 | Hepatitis C virus subtype 6k isolate KM45, complete genome | 163 | ................... | 181 | 100 |
AY878651.1 | Hepatitis C virus subtype 6k isolate KM41, complete genome | 148 | ................... | 166 | 100 |
DQ071885.1 | Hepatitis C virus subtype 1b polyprotein mRNA, complete cds | 180 | ................... | 198 | 100 |
DQ278891.1 | Hepatitis C virus subtype 6k isolate KM45, complete genome | 179 | ................... | 197 | 100 |
DQ278893.1 | Hepatitis C virus subtype 6k isolate KM41, complete genome | 180 | ................... | 198 | 100 |
DQ314805.1 | Hepatitis C virus subtype 6e isolate GX004, complete genome | 177 | ................... | 195 | 100 |
DQ314806.1 | Hepatitis C virus subtype 6g isolate HK6554, complete genome | 177 | ................... | 195 | 100 |
AJ851228.1 | Hepatitis C virus gene for polyprotein, genomic RNA, isolate Equatori | 152 | ................... | 170 | 100 |
DQ835761.1 | Hepatitis C virus subtype 6j isolate C-0667, complete genome | 177 | ................... | 195 | 100 |
DQ835762.1 | Hepatitis C virus subtype 6i isolate C-0159, complete genome | 177 | ................... | 195 | 100 |
DQ835769.1 | Hepatitis C virus subtype 6j isolate Th553, complete genome | 177 | ................... | 195 | 100 |
DQ835770.1 | Hepatitis C virus subtype 6i isolate Th602, complete genome | 177 | ................... | 195 | 100 |
EF032883.1 | Hepatitis C virus subtype 1a isolate 03-32_P1_10.16.03 polyprotein ge | 102 | ................... | 120 | 100 |
EF032884.1 | Hepatitis C virus subtype 1a isolate 03-32_P2_5.14.04 polyprotein gen | 81 | ................... | 99 | 100 |
EF032885.1 | Hepatitis C virus subtype 1a isolate 03-32_P4_11.5.05 polyprotein gen | 101 | ................... | 119 | 100 |
EF032886.1 | Hepatitis C virus subtype 1a isolate BR601 polyprotein gene, complete | 107 | ................... | 125 | 100 |
EF032887.1 | Hepatitis C virus subtype 1a isolate BR554_P1_5.23.03 polyprotein gen | 114 | ................... | 132 | 100 |
EF032888.1 | Hepatitis C virus subtype 1a isolate BR554_P10_10.21.03 polyprotein g | 102 | ................... | 120 | 100 |
EF032889.1 | Hepatitis C virus subtype 1a isolate BR554_P16_6.24.04 polyprotein ge | 86 | ................... | 104 | 100 |
EF032890.1 | Hepatitis C virus subtype 1a isolate BR554_P17_10.21.04 polyprotein g | 100 | ................... | 118 | 100 |
EF032892.1 | Hepatitis C virus subtype 1b isolate BR1427_P1_10.7.03 polyprotein ge | 156 | ................... | 174 | 100 |
EF032893.1 | Hepatitis C virus subtype 1b isolate BR1427_P3_11.10.03 polyprotein g | 154 | ................... | 172 | 100 |
EF032900.1 | Hepatitis C virus subtype 1a isolate BR111_P5_4.30.03 polyprotein gen | 100 | ................... | 118 | 100 |
AB249644.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima | 180 | ................... | 198 | 100 |
EF424625.1 | Hepatitis C virus subtype 6q isolate QC99, complete genome | 177 | ................... | 195 | 100 |
EF424626.1 | Hepatitis C virus subtype 6p isolate QC216, complete genome | 177 | ................... | 195 | 100 |
EF424627.1 | Hepatitis C virus subtype 6o isolate QC227, complete genome | 177 | ................... | 195 | 100 |
EF424628.1 | Hepatitis C virus subtype 6l isolate 537796, complete genome | 177 | ................... | 195 | 100 |
EF621489.1 | Hepatitis C virus subtype 1a strain HC-TN, complete genome | 180 | ................... | 198 | 100 |
EF638081.1 | Hepatitis C virus subtype 1b from Hubei, complete genome | 136 | ................... | 154 | 100 |
EF407411.1 | Hepatitis C virus isolate 5043 polyprotein gene, complete cds | 86 | ................... | 104 | 100 |
EF407413.1 | Hepatitis C virus isolate 5012 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407414.1 | Hepatitis C virus isolate 7018 polyprotein gene, complete cds | 83 | ................... | 101 | 100 |
EF407415.1 | Hepatitis C virus isolate 3018 polyprotein gene, complete cds | 130 | ................... | 148 | 100 |
EF407417.1 | Hepatitis C virus isolate 4040 polyprotein gene, complete cds | 139 | ................... | 157 | 100 |
EF407418.1 | Hepatitis C virus isolate 7020 polyprotein gene, complete cds | 124 | ................... | 142 | 100 |
EF407419.1 | Hepatitis C virus isolate 5003 polyprotein gene, complete cds | 131 | ................... | 149 | 100 |
EF407421.1 | Hepatitis C virus isolate 8030 polyprotein gene, complete cds | 83 | ................... | 101 | 100 |
EF407422.1 | Hepatitis C virus isolate 6001 polyprotein gene, complete cds | 86 | ................... | 104 | 100 |
EF407423.1 | Hepatitis C virus isolate 8028 polyprotein gene, complete cds | 126 | ................... | 144 | 100 |
EF407424.1 | Hepatitis C virus isolate 5069 polyprotein gene, partial cds | 104 | ................... | 122 | 100 |
EF407425.1 | Hepatitis C virus isolate 6071 polyprotein gene, complete cds | 94 | ................... | 112 | 100 |
EF407426.1 | Hepatitis C virus isolate 8070 polyprotein genomic sequence | 129 | ................... | 147 | 100 |
EF407427.1 | Hepatitis C virus isolate 6025 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407428.1 | Hepatitis C virus isolate 1024 polyprotein gene, complete cds | 86 | ................... | 104 | 100 |
EF407431.1 | Hepatitis C virus isolate 3005 polyprotein gene, complete cds | 78 | ................... | 96 | 100 |
EF407432.1 | Hepatitis C virus isolate 1013 polyprotein gene, complete cds | 141 | ................... | 159 | 100 |
EF407433.1 | Hepatitis C virus isolate 7046 polyprotein gene, complete cds | 131 | ................... | 149 | 100 |
EF407434.1 | Hepatitis C virus isolate 2011 polyprotein gene, complete cds | 102 | ................... | 120 | 100 |
EF407435.1 | Hepatitis C virus isolate 5014 polyprotein gene, complete cds | 97 | ................... | 115 | 100 |
EF407436.1 | Hepatitis C virus isolate 7040 polyprotein gene, complete cds | 85 | ................... | 103 | 100 |
EF407437.1 | Hepatitis C virus isolate 1030 polyprotein gene, complete cds | 140 | ................... | 158 | 100 |
EF407438.1 | Hepatitis C virus isolate 7012 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407439.1 | Hepatitis C virus isolate 8003 polyprotein gene, complete cds | 125 | ................... | 143 | 100 |
EF407440.1 | Hepatitis C virus isolate 7002 polyprotein gene, complete cds | 128 | ................... | 146 | 100 |
EF407441.1 | Hepatitis C virus isolate 1036 polyprotein gene, complete cds | 139 | ................... | 157 | 100 |
EF407442.1 | Hepatitis C virus isolate 8012 polyprotein gene, complete cds | 94 | ................... | 112 | 100 |
EF407443.1 | Hepatitis C virus isolate 7024 polyprotein gene, complete cds | 140 | ................... | 158 | 100 |
EF407444.1 | Hepatitis C virus isolate 6030 polyprotein gene, complete cds | 100 | ................... | 118 | 100 |
EF407445.1 | Hepatitis C virus isolate 5009 polyprotein gene, complete cds | 101 | ................... | 119 | 100 |
EF407447.1 | Hepatitis C virus isolate 8004 polyprotein gene, complete cds | 140 | ................... | 158 | 100 |
EF407448.1 | Hepatitis C virus isolate 6018 polyprotein gene, partial cds | 140 | ................... | 158 | 100 |
EF407449.1 | Hepatitis C virus isolate 2027 polyprotein gene, complete cds | 140 | ................... | 158 | 100 |
EF407450.1 | Hepatitis C virus isolate 6020 polyprotein gene, complete cds | 98 | ................... | 116 | 100 |
EF407451.1 | Hepatitis C virus isolate 7041 polyprotein gene, complete cds | 103 | ................... | 121 | 100 |
EF407452.1 | Hepatitis C virus isolate 2005 polyprotein gene, complete cds | 111 | ................... | 129 | 100 |
EF407453.1 | Hepatitis C virus isolate 4035 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407454.1 | Hepatitis C virus isolate 6031 polyprotein gene, complete cds | 92 | ................... | 110 | 100 |
EF407455.1 | Hepatitis C virus isolate 7065 polyprotein gene, complete cds | 140 | ................... | 158 | 100 |
EF407456.1 | Hepatitis C virus isolate 4025 polyprotein gene, complete cds | 139 | ................... | 157 | 100 |
EF407460.1 | Hepatitis C virus isolate 8007 polyprotein gene, complete cds | 130 | ................... | 148 | 100 |
EF407461.1 | Hepatitis C virus isolate 5004 polyprotein gene, complete cds | 160 | ................... | 178 | 100 |
EF407465.1 | Hepatitis C virus isolate 6017 polyprotein gene, complete cds | 125 | ................... | 143 | 100 |
EF407469.1 | Hepatitis C virus isolate 4014 polyprotein gene, complete cds | 124 | ................... | 142 | 100 |
EF407470.1 | Hepatitis C virus isolate 4064 polyprotein gene, complete cds | 132 | ................... | 150 | 100 |
EF407471.1 | Hepatitis C virus isolate 5044 polyprotein gene, complete cds | 125 | ................... | 143 | 100 |
EF407472.1 | Hepatitis C virus isolate 4034 polyprotein gene, complete cds | 126 | ................... | 144 | 100 |
EF407475.1 | Hepatitis C virus isolate 3009 polyprotein gene, complete cds | 112 | ................... | 130 | 100 |
EF407476.1 | Hepatitis C virus isolate 3012 polyprotein gene, complete cds | 112 | ................... | 130 | 100 |
EF407479.1 | Hepatitis C virus isolate 4036 polyprotein gene, complete cds | 125 | ................... | 143 | 100 |
EF407482.1 | Hepatitis C virus isolate 6053 polyprotein gene, complete cds | 65 | ................... | 83 | 100 |
EF407483.1 | Hepatitis C virus isolate 4043 polyprotein gene, complete cds | 155 | ................... | 173 | 100 |
EF407485.1 | Hepatitis C virus isolate 7026 polyprotein gene, complete cds | 135 | ................... | 153 | 100 |
EF407487.1 | Hepatitis C virus isolate 6057 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407488.1 | Hepatitis C virus isolate 8016 polyprotein gene, complete cds | 124 | ................... | 142 | 100 |
EF407493.1 | Hepatitis C virus isolate 3031 polyprotein gene, complete cds | 135 | ................... | 153 | 100 |
EF407497.1 | Hepatitis C virus isolate 5002 polyprotein gene, complete cds | 124 | ................... | 142 | 100 |
EF407501.1 | Hepatitis C virus isolate 7055 polyprotein gene, complete cds | 153 | ................... | 171 | 100 |
EF407503.1 | Hepatitis C virus isolate 5083 polyprotein gene, complete cds | 127 | ................... | 145 | 100 |
EF407504.1 | Hepatitis C virus isolate 8069 polyprotein gene, complete cds | 134 | ................... | 152 | 100 |
EF589161.1 | Hepatitis C virus subtype 4f strain IFBT88 polyprotein gene, partial | 113 | ................... | 131 | 100 |
EF632069.1 | Hepatitis C virus isolate TV241, complete genome | 177 | ................... | 195 | 100 |
EF632071.1 | Hepatitis C virus isolate VT21, complete genome | 163 | ................... | 181 | 100 |
EU155241.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V71/2002, complete | 76 | ................... | 94 | 100 |
EU155294.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V329/2002, complet | 74 | ................... | 92 | 100 |
EU155345.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V221/2002, complet | 88 | ................... | 106 | 100 |
EU155350.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V256/2003, complet | 61 | ................... | 79 | 100 |
EU155379.1 | Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V29/2003, complete | 76 | ................... | 94 | 100 |
EU260395.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V10/2005, complete | 113 | ................... | 131 | 100 |
EU246933.1 | Hepatitis C virus strain D33 polyprotein gene, complete cds | 152 | ................... | 170 | 100 |
EU246939.1 | Hepatitis C virus strain D49 polyprotein gene, complete cds | 152 | ................... | 170 | 100 |
EU362877.1 | Hepatitis C virus isolate 1024_FU24 polyprotein (pol) gene, complete | 85 | ................... | 103 | 100 |
EU362878.1 | Hepatitis C virus isolate 1030_FU24 polyprotein (pol) gene, partial c | 140 | ................... | 158 | 100 |
EU362879.1 | Hepatitis C virus isolate 2005_FU24 polyprotein (pol) gene, partial c | 139 | ................... | 157 | 100 |
EU362880.1 | Hepatitis C virus isolate 2011_FU24 polyprotein (pol) gene, partial c | 101 | ................... | 119 | 100 |
EU362881.1 | Hepatitis C virus isolate 2027_FU24 polyprotein (pol) gene, partial c | 141 | ................... | 159 | 100 |
EU362882.1 | Hepatitis C virus isolate 3005_FU24 polyprotein (pol) gene, complete | 99 | ................... | 117 | 100 |
EU362883.1 | Hepatitis C virus isolate 4025_FU24 polyprotein (pol) gene, partial c | 139 | ................... | 157 | 100 |
EU362884.1 | Hepatitis C virus isolate 4035_FU24 polyprotein (pol) gene, complete | 142 | ................... | 160 | 100 |
EU362885.1 | Hepatitis C virus isolate 5009_FU24 polyprotein (pol) gene, partial c | 98 | ................... | 116 | 100 |
EU362886.1 | Hepatitis C virus isolate 5014_FU24 polyprotein (pol) gene, complete | 102 | ................... | 120 | 100 |
EU362887.1 | Hepatitis C virus isolate 6020_FU24 polyprotein (pol) gene, complete | 98 | ................... | 116 | 100 |
EU362890.1 | Hepatitis C virus isolate 7002_FU24 polyprotein (pol) gene, partial c | 139 | ................... | 157 | 100 |
EU362891.1 | Hepatitis C virus isolate 7003_FU24 polyprotein (pol) gene, partial c | 102 | ................... | 120 | 100 |
EU362892.1 | Hepatitis C virus isolate 7012_FU24 polyprotein (pol) gene, complete | 125 | ................... | 143 | 100 |
EU362893.1 | Hepatitis C virus isolate 7040_FU24 polyprotein (pol) gene, complete | 88 | ................... | 106 | 100 |
EU362894.1 | Hepatitis C virus isolate 7041_FU24 polyprotein (pol) gene, partial c | 77 | ................... | 95 | 100 |
EU362895.1 | Hepatitis C virus isolate 7043_FU24 polyprotein (pol) gene, complete | 98 | ................... | 116 | 100 |
EU362896.1 | Hepatitis C virus isolate 7046_FU24 polyprotein (pol) gene, complete | 139 | ................... | 157 | 100 |
EU362897.1 | Hepatitis C virus isolate 7065_FU24 polyprotein (pol) gene, complete | 139 | ................... | 157 | 100 |
EU362898.1 | Hepatitis C virus isolate 8012_FU24 polyprotein (pol) gene, complete | 84 | ................... | 102 | 100 |
EU362899.1 | Hepatitis C virus isolate 1013q polyprotein (pol) gene, partial cds | 141 | ................... | 159 | 100 |
EU362900.1 | Hepatitis C virus isolate 1030q polyprotein (pol) gene, partial cds | 140 | ................... | 158 | 100 |
EU362901.1 | Hepatitis C virus isolate 2011q polyprotein (pol) gene, complete cds | 102 | ................... | 120 | 100 |
EU362902.1 | Hepatitis C virus isolate 2027q polyprotein (pol) gene, partial cds | 140 | ................... | 158 | 100 |
EU362903.1 | Hepatitis C virus isolate 4025q polyprotein (pol) gene, partial cds | 139 | ................... | 157 | 100 |
EU362907.1 | Hepatitis C virus isolate 7002q polyprotein (pol) gene, complete cds | 128 | ................... | 146 | 100 |
EU239713.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V316/2001, complet | 128 | ................... | 146 | 100 |
EU239714.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V417/2001, complet | 128 | ................... | 146 | 100 |
EU239715.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V423/2003, complet | 106 | ................... | 124 | 100 |
EU239716.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V431/2002, complet | 97 | ................... | 115 | 100 |
EU250017.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V508/2001, complet | 97 | ................... | 115 | 100 |
EU260396.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V11/2004, complete | 83 | ................... | 101 | 100 |
EU234061.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V126/1991, complet | 128 | ................... | 146 | 100 |
EU234062.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V135/1992, complet | 128 | ................... | 146 | 100 |
EU234063.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V177/1992, complet | 101 | ................... | 119 | 100 |
EU234064.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V182/1990, complet | 94 | ................... | 112 | 100 |
EU155213.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V101/2004, complet | 109 | ................... | 127 | 100 |
EU155215.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V105/2004, complet | 75 | ................... | 93 | 100 |
EU155216.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V115/2001, complet | 99 | ................... | 117 | 100 |
EU155217.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V142/2004, complet | 128 | ................... | 146 | 100 |
EU155218.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V145/2005, complet | 129 | ................... | 147 | 100 |
EU155219.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V146/2002, complet | 128 | ................... | 146 | 100 |
EU155220.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V147/2004, complet | 114 | ................... | 132 | 100 |
EU155221.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V148/2004, complet | 128 | ................... | 146 | 100 |
EU155222.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V150/2004, complet | 128 | ................... | 146 | 100 |
EU155223.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V151/2002, complet | 128 | ................... | 146 | 100 |
EU155224.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V152/2003, complet | 128 | ................... | 146 | 100 |
EU155225.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V155/2003, complet | 129 | ................... | 147 | 100 |
EU155226.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V156/2004, complet | 128 | ................... | 146 | 100 |
EU155227.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V157/2003, complet | 128 | ................... | 146 | 100 |
EU155228.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V158/2003, complet | 128 | ................... | 146 | 100 |
EU155229.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V159/2004, complet | 128 | ................... | 146 | 100 |
EU155230.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V160/2002, complet | 128 | ................... | 146 | 100 |
EU155231.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V163/2002, complet | 128 | ................... | 146 | 100 |
EU155232.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V164/2002, complet | 128 | ................... | 146 | 100 |
EU155233.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V445/2006, complet | 107 | ................... | 125 | 100 |
EU155234.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V447/2006, complet | 128 | ................... | 146 | 100 |
EU155235.2 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V449/2006, complet | 128 | ................... | 146 | 100 |
EU155236.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V450/2006, complet | 71 | ................... | 89 | 100 |
EU155237.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V457/2006, complet | 121 | ................... | 139 | 100 |
EU155238.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V465/2007, complet | 106 | ................... | 124 | 100 |
EU155239.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V54/2004, complete | 98 | ................... | 116 | 100 |
EU155240.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V68/2004, complete | 97 | ................... | 115 | 100 |
EU155243.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V86/2005, complete | 75 | ................... | 93 | 100 |
EU155244.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V90/2005, complete | 121 | ................... | 139 | 100 |
EU155245.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V91/2003, complete | 98 | ................... | 116 | 100 |
EU155246.2 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V93/2003, complete | 99 | ................... | 117 | 100 |
EU482831.1 | Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V25/2003, complete | 85 | ................... | 103 | 100 |
EU482832.1 | Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V33/2004, complete | 90 | ................... | 108 | 100 |
EU482833.1 | Hepatitis C virus subtype 1b isolate HCV-1b/DE/BID-V503/2003, complet | 128 | ................... | 146 | 100 |
EU482834.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V422/2002, complet | 62 | ................... | 80 | 100 |
EU482835.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V427/2002, complet | 113 | ................... | 131 | 100 |
EU482836.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V506/2002, complet | 111 | ................... | 129 | 100 |
EU482837.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V17/2004, complete | 97 | ................... | 115 | 100 |
EU482838.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V361/2006, complet | 112 | ................... | 130 | 100 |
EU482839.1 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V370/2006, complet | 128 | ................... | 146 | 100 |
EU482840.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V386/2004, complet | 118 | ................... | 136 | 100 |
EU482841.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V387/2004, complet | 113 | ................... | 131 | 100 |
EU482842.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V389/2006, complet | 85 | ................... | 103 | 100 |
EU482843.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V435/2005, complet | 107 | ................... | 125 | 100 |
EU482844.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V436/2006, complet | 114 | ................... | 132 | 100 |
EU482846.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V439/2000, complet | 107 | ................... | 125 | 100 |
EU482847.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V5/2004, complete | 97 | ................... | 115 | 100 |
EU482848.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V9/2005, complete | 82 | ................... | 100 | 100 |
EU482849.1 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V138/1989, complet | 128 | ................... | 146 | 100 |
EU482850.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V186/1990, complet | 75 | ................... | 93 | 100 |
EU482852.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V217/1989, complet | 97 | ................... | 115 | 100 |
EU482853.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V227/2005, complet | 99 | ................... | 117 | 100 |
EU482854.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V242/2001, complet | 97 | ................... | 115 | 100 |
EU482855.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V249/2002, complet | 91 | ................... | 109 | 100 |
EU482856.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V250/2002, complet | 98 | ................... | 116 | 100 |
EU482857.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V263/2005, complet | 97 | ................... | 115 | 100 |
EU482858.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V271/2006, complet | 104 | ................... | 122 | 100 |
EU482859.1 | Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V272/2003, complet | 128 | ................... | 146 | 100 |
EU482860.1 | Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V302/2003, complet | 128 | ................... | 146 | 100 |
EU482861.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V446/2006, complet | 106 | ................... | 124 | 100 |
EU482862.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V454/2006, complet | 106 | ................... | 124 | 100 |
EU482863.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V456/2006, complet | 109 | ................... | 127 | 100 |
EU482864.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V459/2006, complet | 113 | ................... | 131 | 100 |
EU482865.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V46/2003, complete | 86 | ................... | 104 | 100 |
EU482866.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V460/2006, complet | 113 | ................... | 131 | 100 |
EU482867.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V461/2006, complet | 112 | ................... | 130 | 100 |
EU482868.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V69/2002, complete | 97 | ................... | 115 | 100 |
EU482869.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V70/2002, complete | 97 | ................... | 115 | 100 |
EU482870.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V75/2004, complete | 121 | ................... | 139 | 100 |
EU482871.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V77/2002, complete | 89 | ................... | 107 | 100 |
EU482872.1 | Hepatitis C virus subtype 1a isolate HCV-1a/CH/BID-V261/2004, complet | 106 | ................... | 124 | 100 |
EU482873.1 | Hepatitis C virus subtype 1a isolate HCV-1a/DE/BID-V28/2003, complete | 91 | ................... | 109 | 100 |
EU482874.1 | Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V287/2005, complet | 128 | ................... | 146 | 100 |
EU482875.1 | Hepatitis C virus subtype 1b isolate HCV-1b/CH/BID-V310/2005, complet | 128 | ................... | 146 | 100 |
EU482876.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V330/2002, complet | 106 | ................... | 124 | 100 |
EU482877.1 | Hepatitis C virus subtype 1b isolate HCV-1b/US/BID-V342/2001, complet | 128 | ................... | 146 | 100 |
EU482878.1 | Hepatitis C virus subtype 1a isolate HCV-1a/US/BID-V19/2004, complete | 106 | ................... | 124 | 100 |